Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine synthase a | EDD54_2951 | Not Available | Positive | 3184316 - 3185281 | 33650.9 |
| 8-oxo-dgtp pyrophosphatase mutt (nudix family) | EDD54_2952 | Not Available | Negative | 3185347 - 3185838 | 17971.6 |
| dna polymerase-3 subunit epsilon | EDD54_2953 | Not Available | Negative | 3185913 - 3186635 | 26335.3 |
| dephospho-coa kinase | EDD54_2954 | Not Available | Negative | 3186726 - 3187307 | 20268.5 |
| shikimate dehydrogenase | EDD54_2955 | Not Available | Negative | 3187304 - 3188122 | 28432.9 |
| septum formation protein | EDD54_2956 | Not Available | Negative | 3188119 - 3188712 | 20598.8 |
| hypothetical protein | EDD54_2957 | Not Available | Negative | 3188763 - 3189617 | 31483.9 |
| uroporphyrinogen decarboxylase | EDD54_2958 | Not Available | Positive | 3190156 - 3191238 | 38304.1 |
| putative membrane protein | EDD54_2959 | Not Available | Positive | 3191231 - 3191662 | 16106.0 |
| transcription termination factor rho | EDD54_2960 | Not Available | Positive | 3191962 - 3193227 | 47221.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
