Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative two-component system response regulator | EDD54_2881 | Not Available | Positive | 3103703 - 3104755 | 38345.2 |
| hypothetical protein | EDD54_2882 | Not Available | Positive | 3104787 - 3105284 | 17228.7 |
| signal transduction histidine kinase | EDD54_2883 | Not Available | Positive | 3105319 - 3107835 | 88813.7 |
| transcriptional regulator | EDD54_2884 | Not Available | Negative | 3107888 - 3108253 | 13071.7 |
| dna-nicking smr family endonuclease | EDD54_2885 | Not Available | Negative | 3108259 - 3108825 | 20599.2 |
| membrane-bound lytic murein transglycosylase a | EDD54_2886 | Not Available | Negative | 3108815 - 3109939 | 40047.8 |
| putative lipid-binding transport protein (tim44 family) | EDD54_2887 | Not Available | Negative | 3109947 - 3110663 | 25733.2 |
| upf0716 protein fxsa | EDD54_2888 | Not Available | Positive | 3110887 - 3111405 | 18091.5 |
| protein translocase subunit secb | EDD54_2889 | Not Available | Positive | 3111553 - 3112029 | 17594.0 |
| hypothetical protein | EDD54_2890 | Not Available | Negative | 3112117 - 3112488 | 13853.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
