Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system atp-binding protein | EDD54_2700 | Not Available | Negative | 2893852 - 2894928 | 38578.4 |
| spermidine/putrescine transport system permease protein | EDD54_2701 | Not Available | Negative | 2894931 - 2895713 | 28123.2 |
| spermidine/putrescine transport system permease protein | EDD54_2702 | Not Available | Negative | 2895731 - 2896591 | 31604.7 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | EDD54_2703 | Not Available | Negative | 2896822 - 2899929 | 108779.0 |
| asnc family transcriptional regulator | EDD54_2704 | Not Available | Positive | 2900119 - 2900628 | 18906.1 |
| farnesyl-diphosphate synthase | EDD54_2705 | Not Available | Positive | 2901185 - 2902111 | 31444.6 |
| hypothetical protein | EDD54_2706 | Not Available | Negative | 2902131 - 2902337 | 7814.65 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | EDD54_2707 | Not Available | Negative | 2902340 - 2903602 | 44936.1 |
| fur family zinc uptake transcriptional regulator | EDD54_2708 | Not Available | Negative | 2903599 - 2904126 | 18699.3 |
| short-subunit dehydrogenase | EDD54_2709 | Not Available | Positive | 2904248 - 2905096 | 30304.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
