Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | EDD54_2660 | Not Available | Negative | 2862928 - 2864199 | 45232.0 |
| putative lipoprotein | EDD54_2661 | Not Available | Negative | 2864227 - 2864448 | 7342.09 |
| argininosuccinate lyase | EDD54_2662 | Not Available | Negative | 2864548 - 2865927 | 49743.5 |
| thiol-disulfide isomerase/thioredoxin | EDD54_2663 | Not Available | Positive | 2865962 - 2866615 | 22490.9 |
| hypothetical protein | EDD54_2664 | Not Available | Negative | 2866650 - 2866886 | 8560.21 |
| hypothetical protein | EDD54_2665 | Not Available | Negative | 2867097 - 2867300 | 6690.97 |
| g3e family gtpase | EDD54_2666 | Not Available | Negative | 2867369 - 2868589 | 43914.2 |
| d-alanyl-d-alanine carboxypeptidase | EDD54_2667 | Not Available | Negative | 2868697 - 2869875 | 40367.1 |
| urease accessory protein | EDD54_2668 | Not Available | Positive | 2870103 - 2871041 | 32358.6 |
| urease subunit gamma | EDD54_2669 | Not Available | Positive | 2871064 - 2871366 | 10944.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
