Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative zn-dependent protease | EDD54_2620 | Not Available | Negative | 2814035 - 2815549 | 53311.3 |
| nuclease-like protein | EDD54_2621 | Not Available | Negative | 2815554 - 2816444 | 29700.7 |
| 3-dehydroquinate synthase | EDD54_2622 | Not Available | Negative | 2816601 - 2817722 | 39409.5 |
| shikimate kinase | EDD54_2623 | Not Available | Negative | 2817719 - 2818351 | 22821.2 |
| hypothetical protein | EDD54_2624 | Not Available | Positive | 2818463 - 2818633 | 5988.5 |
| integrase/recombinase xerd | EDD54_2625 | Not Available | Positive | 2818651 - 2819574 | 32594.3 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | EDD54_2626 | Not Available | Positive | 2819702 - 2820661 | 34040.8 |
| murein l,d-transpeptidase yafk | EDD54_2627 | Not Available | Positive | 2820784 - 2822478 | 58726.2 |
| ribosomal protein s18 acetylase rimi-like enzyme | EDD54_2628 | Not Available | Positive | 2822646 - 2823158 | 18954.1 |
| hypothetical protein | EDD54_2629 | Not Available | Negative | 2823313 - 2823906 | 20545.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
