Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l34p | EDD54_2506 | Not Available | Negative | 2684846 - 2684980 | 5193.59 |
| putative polysaccharide biosynthesis protein | EDD54_2507 | Not Available | Negative | 2685175 - 2686407 | 44032.1 |
| hypothetical protein | EDD54_2508 | Not Available | Negative | 2686404 - 2687225 | 27958.5 |
| putative membrane protein ydjx (tvp38/tmem64 family) | EDD54_2509 | Not Available | Positive | 2687496 - 2688314 | 28081.8 |
| pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (e3) component | EDD54_2510 | Not Available | Positive | 2688311 - 2689738 | 48897.1 |
| signal transduction histidine kinase /histidine kinase | EDD54_2511 | Not Available | Positive | 2689843 - 2691315 | 53098.3 |
| Trna-arg | Not Available | Not Available | Positive | 2691484 - 2691560 | Not Available |
| helix-turn-helix protein | EDD54_2513 | Not Available | Negative | 2691738 - 2691986 | 8744.38 |
| uncharacterized protein duf2628 | EDD54_2514 | Not Available | Positive | 2692088 - 2692609 | 18883.4 |
| putative oligomerization/nucleic acid binding protein | EDD54_2515 | Not Available | Positive | 2692641 - 2693138 | 18395.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
