Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated cas2 family protein | EDD54_2266 | Not Available | Negative | 2434135 - 2434458 | 11926.4 |
| crispr-associated endonuclease cas1 | EDD54_2267 | Not Available | Negative | 2434472 - 2435737 | 46152.5 |
| crispr-associated protein csb2 | EDD54_2268 | Not Available | Negative | 2436107 - 2438275 | 77395.6 |
| crispr-associated csx4 family protein | EDD54_2269 | Not Available | Negative | 2438322 - 2439428 | 39370.1 |
| crispr-associated protein csx14 | EDD54_2270 | Not Available | Negative | 2439425 - 2440327 | 31806.9 |
| crispr-associated endonuclease/helicase cas3 | EDD54_2271 | Not Available | Negative | 2440327 - 2443125 | 99208.4 |
| flavin reductase (dim6/ntab) family nadh-fmn oxidoreductase rutf | EDD54_2272 | Not Available | Negative | 2445559 - 2446107 | 19858.7 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | EDD54_2273 | Not Available | Negative | 2446256 - 2447476 | 43851.1 |
| pimeloyl-acp methyl ester carboxylesterase | EDD54_2274 | Not Available | Negative | 2447570 - 2448358 | 28036.8 |
| (r,r)-butanediol dehydrogenase/meso-butanediol dehydrogenase/diacetyl reductase | EDD54_2275 | Not Available | Negative | 2448355 - 2449389 | 35661.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
