Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | EDD54_1008 | Not Available | Negative | 1099324 - 1100202 | 29603.8 |
| tetratricopeptide repeat protein | EDD54_1009 | Not Available | Negative | 1100199 - 1102004 | 65109.5 |
| hypothetical protein | EDD54_1010 | Not Available | Positive | 1102171 - 1102536 | 13162.9 |
| hypothetical protein | EDD54_1011 | Not Available | Negative | 1102635 - 1102826 | 6822.47 |
| signal peptide peptidase sppa | EDD54_1012 | Not Available | Negative | 1102924 - 1103781 | 30305.7 |
| trna1(val) a37 n6-methylase trmn6 | EDD54_1013 | Not Available | Negative | 1103846 - 1104652 | 27582.3 |
| putative signal transducing protein | EDD54_1014 | Not Available | Negative | 1104649 - 1104882 | 8436.32 |
| octaprenyl-diphosphate synthase | EDD54_1015 | Not Available | Positive | 1105049 - 1106074 | 36040.3 |
| hypothetical protein | EDD54_1016 | Not Available | Positive | 1106193 - 1107854 | 59089.4 |
| hypothetical protein | EDD54_1017 | Not Available | Positive | 1108035 - 1108469 | 16562.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
