Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemy protein | EDD54_4092 | Not Available | Negative | 4430032 - 4431654 | 57423.9 |
| hypothetical protein | EDD54_4093 | Not Available | Negative | 4431701 - 4433584 | 61419.6 |
| uroporphyrinogen-iii synthase | EDD54_4094 | Not Available | Negative | 4433673 - 4434413 | 24589.5 |
| hydroxymethylbilane synthase | EDD54_4095 | Not Available | Negative | 4434421 - 4435347 | 32123.7 |
| o-sialoglycoprotein endopeptidase | EDD54_4096 | Not Available | Positive | 4435451 - 4436536 | 35991.5 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | EDD54_4097 | Not Available | Positive | 4436584 - 4437579 | 33112.2 |
| transglutaminase-like putative cysteine protease | EDD54_4098 | Not Available | Negative | 4437705 - 4438718 | 35933.5 |
| putative circularly permuted atp-grasp superfamily protein | EDD54_4099 | Not Available | Negative | 4438715 - 4441258 | 91253.2 |
| uncharacterized protein (duf2126 family) | EDD54_4100 | Not Available | Negative | 4441422 - 4444733 | 123475.0 |
| ribosomal protein s18 acetylase rimi-like enzyme | EDD54_4101 | Not Available | Negative | 4444873 - 4445346 | 17668.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
