Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formaldehyde-activating enzyme | EDD54_4069 | Not Available | Positive | 4407762 - 4408301 | 19532.6 |
| hypothetical protein | EDD54_4070 | Not Available | Negative | 4408346 - 4409569 | 41723.3 |
| ribosome-associated protein | EDD54_4071 | Not Available | Positive | 4409683 - 4410111 | 15853.1 |
| hypothetical protein | EDD54_4072 | Not Available | Positive | 4410116 - 4410520 | 13947.6 |
| Trna-ile | Not Available | Not Available | Positive | 4413082 - 4413158 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4413230 - 4413305 | Not Available |
| capsular polysaccharide transport system permease protein | EDD54_4078 | Not Available | Negative | 4417001 - 4418121 | 39624.0 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | EDD54_4079 | Not Available | Negative | 4418353 - 4419198 | 29192.9 |
| Trna-gly | Not Available | Not Available | Positive | 4419330 - 4419404 | Not Available |
| putative amidohydrolase | EDD54_4081 | Not Available | Negative | 4419549 - 4420340 | 27338.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
