Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid transport system substrate-binding protein/arginine/ornithine transport system substrate-binding protein | EDD54_4059 | Not Available | Positive | 4394803 - 4395597 | 28087.3 |
| amino acid abc transporter membrane protein 1 (paat family) | EDD54_4060 | Not Available | Positive | 4395740 - 4396459 | 24738.8 |
| amino acid abc transporter membrane protein 2 (paat family) | EDD54_4061 | Not Available | Positive | 4396464 - 4397180 | 25837.4 |
| dimethylargininase | EDD54_4062 | Not Available | Negative | 4397188 - 4397982 | 27888.6 |
| methyltransferase family protein | EDD54_4063 | Not Available | Positive | 4398126 - 4399328 | 44750.7 |
| diguanylate cyclase/phosphodiesterase | EDD54_4064 | Not Available | Positive | 4399430 - 4401808 | 84682.4 |
| dna-binding transcriptional lysr family regulator | EDD54_4065 | Not Available | Negative | 4401958 - 4402878 | 33621.9 |
| sugar transport protein | EDD54_4066 | Not Available | Negative | 4403058 - 4404785 | 61462.4 |
| methylenetetrahydrofolate dehydrogenase (nadp+)/methenyltetrahydrofolate cyclohydrolase | EDD54_4067 | Not Available | Positive | 4405236 - 4406105 | 29842.6 |
| methyltransferase family protein | EDD54_4068 | Not Available | Negative | 4406187 - 4407440 | 46369.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
