Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDD54_3908 | Not Available | Positive | 4215180 - 4215551 | 11977.7 |
| uncharacterized protein ycni | EDD54_3909 | Not Available | Positive | 4215757 - 4216290 | 18651.2 |
| copper transport protein | EDD54_3910 | Not Available | Positive | 4216710 - 4218290 | 52620.6 |
| uncharacterized protein yrai | EDD54_3911 | Not Available | Positive | 4218536 - 4219225 | 25561.8 |
| excinuclease abc subunit b | EDD54_3912 | Not Available | Positive | 4219442 - 4222138 | 98756.3 |
| putative endonuclease | EDD54_3913 | Not Available | Negative | 4223623 - 4223928 | 11872.3 |
| hypothetical protein | EDD54_3914 | Not Available | Positive | 4224440 - 4225180 | 26194.0 |
| collagen triple helix repeat protein | EDD54_3915 | Not Available | Negative | 4225084 - 4226007 | 30406.9 |
| sulfoxide reductase catalytic subunit yedy | EDD54_3916 | Not Available | Positive | 4226408 - 4227370 | 35550.6 |
| hypothetical protein | EDD54_3917 | Not Available | Positive | 4227576 - 4228445 | 31037.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
