Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef)-like protein | EDD54_3878 | Not Available | Positive | 4186767 - 4188587 | 64289.0 |
| pth1 family peptidyl-trna hydrolase | EDD54_3879 | Not Available | Negative | 4188599 - 4189363 | 27071.7 |
| large subunit ribosomal protein l25 | EDD54_3880 | Not Available | Negative | 4189476 - 4190069 | 21288.3 |
| formylglycine-generating enzyme required for sulfatase activity | EDD54_3881 | Not Available | Positive | 4190314 - 4191924 | 56098.8 |
| caspase domain-containing protein | EDD54_3882 | Not Available | Negative | 4191971 - 4193485 | 52597.1 |
| ribose-phosphate pyrophosphokinase | EDD54_3883 | Not Available | Negative | 4193693 - 4194625 | 33228.9 |
| hypothetical protein | EDD54_3884 | Not Available | Negative | 4194786 - 4195406 | 21075.0 |
| xaa-pro dipeptidase | EDD54_3885 | Not Available | Negative | 4195512 - 4196666 | 40839.1 |
| hypothetical protein | EDD54_3886 | Not Available | Negative | 4196678 - 4197457 | 27383.3 |
| sam-dependent mida family methyltransferase | EDD54_3887 | Not Available | Negative | 4197505 - 4198590 | 37041.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
