Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDD54_3828 | Not Available | Positive | 4136247 - 4136840 | 20864.8 |
| choline dehydrogenase | EDD54_3829 | Not Available | Negative | 4136841 - 4138496 | 59709.2 |
| tetr family transcriptional regulator | EDD54_3830 | Not Available | Negative | 4138483 - 4139058 | 21090.5 |
| glycine betaine/proline transport system substrate-binding protein | EDD54_3831 | Not Available | Positive | 4139538 - 4140479 | 33056.4 |
| glycine betaine/proline transport system permease protein | EDD54_3832 | Not Available | Positive | 4140636 - 4141478 | 30124.2 |
| glycine betaine/proline transport system atp-binding protein | EDD54_3833 | Not Available | Positive | 4141475 - 4142563 | 38805.4 |
| betaine aldehyde dehydrogenase | EDD54_3834 | Not Available | Positive | 4142668 - 4144131 | 51630.5 |
| trypsin | EDD54_3835 | Not Available | Positive | 4144237 - 4145082 | 29516.2 |
| marr family protein | EDD54_3836 | Not Available | Positive | 4145246 - 4145596 | 12890.9 |
| cell wall-associated nlpc family hydrolase | EDD54_3837 | Not Available | Positive | 4145593 - 4146462 | 30723.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
