Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate/hydroxypyruvate reductase a | EDD54_3788 | Not Available | Negative | 4090874 - 4091815 | 33197.2 |
| dna recombination protein rmuc | EDD54_3789 | Not Available | Negative | 4091874 - 4093025 | 41627.0 |
| peptide deformylase | EDD54_3790 | Not Available | Positive | 4093176 - 4093694 | 19201.1 |
| hypothetical protein | EDD54_3791 | Not Available | Positive | 4093758 - 4094042 | 9786.47 |
| hypothetical protein | EDD54_3792 | Not Available | Positive | 4094039 - 4094455 | 14880.2 |
| methionyl-trna formyltransferase | EDD54_3793 | Not Available | Positive | 4094498 - 4095442 | 32697.3 |
| trna pseudouridine38-40 synthase | EDD54_3794 | Not Available | Positive | 4095448 - 4096194 | 27629.8 |
| hypothetical protein | EDD54_3795 | Not Available | Positive | 4096617 - 4097069 | 15876.9 |
| 1,4-alpha-glucan branching enzyme | EDD54_3796 | Not Available | Negative | 4097098 - 4099380 | 82905.5 |
| aminobutyraldehyde dehydrogenase | EDD54_3797 | Not Available | Negative | 4099557 - 4100996 | 50555.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
