Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylhomoserine sulfhydrylase | EDD54_3737 | Not Available | Negative | 4038607 - 4039794 | 42388.7 |
| putative membrane protein | EDD54_3738 | Not Available | Positive | 4041394 - 4042188 | 28081.2 |
| ceramidase | EDD54_3739 | Not Available | Positive | 4042264 - 4042932 | 23205.7 |
| dna ligase-1 | EDD54_3740 | Not Available | Negative | 4042933 - 4044573 | 59982.8 |
| putative mrna 3-end processing factor | EDD54_3741 | Not Available | Negative | 4044570 - 4045655 | 38353.6 |
| dctp deaminase | EDD54_3742 | Not Available | Positive | 4045789 - 4046898 | 39984.9 |
| sulfide:quinone oxidoreductase | EDD54_3743 | Not Available | Negative | 4046922 - 4048049 | 40877.5 |
| uncharacterized protein (duf2249 family) | EDD54_3744 | Not Available | Negative | 4048364 - 4048627 | 9565.54 |
| Trna-gly | Not Available | Not Available | Positive | 4049018 - 4049091 | Not Available |
| hypothetical protein | EDD54_3746 | Not Available | Positive | 4049264 - 4049641 | 13753.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
