Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpir family transcriptional regulator | EDD54_3727 | Not Available | Positive | 4024875 - 4025741 | 30926.3 |
| carbohydrate abc transporter atp-binding protein (cut1 family) | EDD54_3728 | Not Available | Positive | 4025799 - 4026851 | 37453.5 |
| carbohydrate abc transporter substrate-binding protein (cut1 family) | EDD54_3729 | Not Available | Positive | 4027003 - 4028658 | 60076.7 |
| carbohydrate abc transporter membrane protein 1 (cut1 family) | EDD54_3730 | Not Available | Positive | 4028791 - 4029909 | 40557.6 |
| carbohydrate abc transporter membrane protein 2 (cut1 family) | EDD54_3731 | Not Available | Positive | 4029923 - 4030861 | 34393.9 |
| putative aminopeptidase frvx | EDD54_3732 | Not Available | Positive | 4030878 - 4032011 | 39785.0 |
| xylulokinase | EDD54_3733 | Not Available | Positive | 4032008 - 4033510 | 52531.5 |
| 5-oxoprolinase (atp-hydrolysing) | EDD54_3734 | Not Available | Positive | 4033615 - 4037238 | 127180.0 |
| apag protein | EDD54_3735 | Not Available | Negative | 4037301 - 4037693 | 14239.9 |
| phosphatidylglycerophosphate synthase | EDD54_3736 | Not Available | Positive | 4037843 - 4038472 | 20846.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
