Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDD54_3617 | Not Available | Negative | 3904110 - 3905300 | 42812.0 |
| hypothetical protein | EDD54_3618 | Not Available | Positive | 3905563 - 3906258 | 23428.0 |
| carbon-monoxide dehydrogenase small subunit | EDD54_3619 | Not Available | Positive | 3906354 - 3906842 | 16957.4 |
| carbon-monoxide dehydrogenase large subunit | EDD54_3620 | Not Available | Positive | 3906883 - 3909234 | 82806.5 |
| carbon-monoxide dehydrogenase medium subunit | EDD54_3621 | Not Available | Positive | 3909252 - 3910046 | 27030.2 |
| sugar phosphate isomerase/epimerase | EDD54_3622 | Not Available | Positive | 3910252 - 3911136 | 30597.5 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | EDD54_3623 | Not Available | Negative | 3911295 - 3912053 | 27095.3 |
| luxr family two component transcriptional regulator | EDD54_3624 | Not Available | Negative | 3912446 - 3913363 | 32326.0 |
| signal transduction histidine kinase | EDD54_3625 | Not Available | Negative | 3913353 - 3916721 | 119443.0 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | EDD54_3626 | Not Available | Positive | 3916974 - 3918266 | 46552.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
