Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | EDD54_3597 | Not Available | Positive | 3877500 - 3878333 | 28786.5 |
| chromate transporter | EDD54_3598 | Not Available | Negative | 3878340 - 3879707 | 46776.2 |
| allosteric nadp-dependent malic enzyme | EDD54_3599 | Not Available | Negative | 3879821 - 3882094 | 81893.7 |
| hypothetical protein | EDD54_3600 | Not Available | Positive | 3882312 - 3883514 | 42070.2 |
| hypothetical protein | EDD54_3601 | Not Available | Positive | 3883631 - 3884866 | 42536.8 |
| putative damage-inducible protein dinb | EDD54_3602 | Not Available | Negative | 3884853 - 3885446 | 21041.0 |
| hypothetical protein | EDD54_3603 | Not Available | Positive | 3885593 - 3886381 | 29242.8 |
| metallo-beta-lactamase family protein | EDD54_3604 | Not Available | Negative | 3886514 - 3888112 | 57528.8 |
| small conductance mechanosensitive channel | EDD54_3605 | Not Available | Positive | 3888200 - 3889183 | 33596.0 |
| dna mismatch repair protein muts | EDD54_3606 | Not Available | Positive | 3889258 - 3891978 | 96570.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
