Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein | EDD54_3564 | Not Available | Negative | 3832712 - 3832987 | 9479.22 |
| kef-type potassium/proton antiporter (cpa2 family) | EDD54_3565 | Not Available | Positive | 3833066 - 3834919 | 63343.0 |
| collagen triple helix repeat protein | EDD54_3566 | Not Available | Positive | 3835231 - 3836298 | 34183.9 |
| Trna-ile | Not Available | Not Available | Positive | 3838646 - 3838722 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3838794 - 3838869 | Not Available |
| o-antigen/teichoic acid export membrane protein | EDD54_3572 | Not Available | Negative | 3843179 - 3844699 | 51713.0 |
| o-antigen ligase | EDD54_3573 | Not Available | Negative | 3844782 - 3846170 | 48755.7 |
| hypothetical protein | EDD54_3574 | Not Available | Negative | 3846266 - 3846685 | 12794.8 |
| putative nucleotidyltransferase-like protein | EDD54_3575 | Not Available | Positive | 3846913 - 3848007 | 37991.1 |
| atp-binding cassette subfamily c protein | EDD54_3576 | Not Available | Positive | 3848004 - 3849707 | 57843.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
