Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate polyprenyltransferase | EDD54_3394 | Not Available | Negative | 3648335 - 3649276 | 34051.6 |
| phosphoribosylamine--glycine ligase | EDD54_3395 | Not Available | Positive | 3649396 - 3650673 | 42930.4 |
| putative nucleic acid-binding protein | EDD54_3396 | Not Available | Negative | 3650684 - 3651100 | 14855.0 |
| prevent-host-death family protein | EDD54_3397 | Not Available | Negative | 3651097 - 3651360 | 9422.07 |
| nte family protein | EDD54_3398 | Not Available | Positive | 3651488 - 3652354 | 30631.2 |
| trna(adenine34) deaminase | EDD54_3399 | Not Available | Negative | 3652338 - 3652829 | 17110.3 |
| 23s rrna pseudouridine2605 synthase | EDD54_3400 | Not Available | Positive | 3652875 - 3654944 | 73968.8 |
| 16s rrna (guanine966-n2)-methyltransferase | EDD54_3401 | Not Available | Positive | 3654925 - 3655485 | 19706.7 |
| hypothetical protein | EDD54_3402 | Not Available | Negative | 3655499 - 3655939 | 15242.1 |
| hypothetical protein | EDD54_3403 | Not Available | Negative | 3655957 - 3656448 | 16922.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
