Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | EDD54_3063 | Not Available | Negative | 3299434 - 3301110 | 60894.6 |
| formiminoglutamase | EDD54_3064 | Not Available | Negative | 3301107 - 3301916 | 29175.5 |
| histidine ammonia-lyase | EDD54_3065 | Not Available | Negative | 3301913 - 3303454 | 51986.9 |
| imidazolonepropionase | EDD54_3066 | Not Available | Negative | 3303451 - 3304704 | 43139.7 |
| molybdopterin-binding protein | EDD54_3067 | Not Available | Positive | 3304837 - 3305043 | 6881.43 |
| hypothetical protein | EDD54_3068 | Not Available | Positive | 3305214 - 3306053 | 29254.1 |
| molybdenum transport protein | EDD54_3069 | Not Available | Positive | 3306064 - 3306951 | 29869.2 |
| nif-specific regulatory protein | EDD54_3070 | Not Available | Positive | 3307143 - 3308906 | 63265.8 |
| nitrogen fixation protein nifb | EDD54_3071 | Not Available | Positive | 3309157 - 3310626 | 53048.4 |
| 4fe-4s binding protein | EDD54_3072 | Not Available | Positive | 3310670 - 3310870 | 7109.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
