Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna processing protein rimm | EDD54_3002 | Not Available | Positive | 3234951 - 3235535 | 20712.4 |
| trna (guanine37-n(1)-) methyltransferase | EDD54_3003 | Not Available | Positive | 3235532 - 3236269 | 25881.0 |
| lsu ribosomal protein l19p | EDD54_3004 | Not Available | Positive | 3236441 - 3236866 | 15312.6 |
| exodeoxyribonuclease-3 | EDD54_3005 | Not Available | Positive | 3236940 - 3237758 | 30407.1 |
| cyclic nucleotide-binding protein | EDD54_3006 | Not Available | Negative | 3237864 - 3238328 | 16898.3 |
| dna-binding response ompr family regulator | EDD54_3007 | Not Available | Negative | 3238486 - 3239169 | 25294.5 |
| l,d-peptidoglycan transpeptidase ykud (erfk/ybis/ycfs/ynhg family) | EDD54_3008 | Not Available | Positive | 3239269 - 3239832 | 20231.5 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | EDD54_3009 | Not Available | Negative | 3239861 - 3241084 | 43313.3 |
| (3s)-malyl-coa thioesterase | EDD54_3010 | Not Available | Positive | 3241253 - 3242116 | 31849.0 |
| nitrogen regulatory protein p-ii family | EDD54_3011 | Not Available | Positive | 3242491 - 3242829 | 12029.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
