Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(hydroxyalkanoate) depolymerase family esterase | EDD54_2841 | Not Available | Positive | 3050031 - 3051263 | 42818.3 |
| hypothetical protein | EDD54_2842 | Not Available | Positive | 3051577 - 3051960 | 13829.6 |
| peptidase m41-like protein | EDD54_2843 | Not Available | Negative | 3052088 - 3054151 | 74408.6 |
| hypothetical protein | EDD54_2844 | Not Available | Negative | 3054174 - 3054518 | 11942.4 |
| hypothetical protein | EDD54_2845 | Not Available | Negative | 3054895 - 3055857 | 32945.0 |
| helix-turn-helix protein | EDD54_2846 | Not Available | Positive | 3055937 - 3056206 | 9836.68 |
| hypothetical protein | EDD54_2847 | Not Available | Positive | 3056914 - 3058362 | 51649.7 |
| hypothetical protein | EDD54_2848 | Not Available | Positive | 3058434 - 3058760 | 12499.9 |
| snf2 domain-containing protein | EDD54_2849 | Not Available | Positive | 3058999 - 3062166 | 118144.0 |
| n-6 dna methylase | EDD54_2850 | Not Available | Positive | 3062169 - 3066176 | 147671.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
