Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein cpac | EDD54_2740 | Not Available | Negative | 2938888 - 2940330 | 50159.8 |
| pilus assembly protein cpab | EDD54_2741 | Not Available | Negative | 2940327 - 2941115 | 27342.0 |
| prepilin peptidase cpaa | EDD54_2742 | Not Available | Negative | 2941245 - 2941766 | 17581.8 |
| pilus assembly protein flp/pila | EDD54_2743 | Not Available | Negative | 2941939 - 2942112 | 5896.14 |
| putative type ii/iii system pilus formation protein | EDD54_2744 | Not Available | Positive | 2942421 - 2942888 | 15713.5 |
| flp pilus assembly protein tadg | EDD54_2745 | Not Available | Positive | 2943046 - 2943612 | 20509.7 |
| flp pilus assembly protein tadg | EDD54_2746 | Not Available | Positive | 2943620 - 2944189 | 20324.7 |
| hypothetical protein | EDD54_2747 | Not Available | Positive | 2944299 - 2945942 | 57584.2 |
| 2-haloacid dehalogenase | EDD54_2748 | Not Available | Positive | 2946017 - 2946634 | 22919.3 |
| aspartyl protease family protein | EDD54_2749 | Not Available | Negative | 2946644 - 2947168 | 17459.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
