Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysyl-trna synthetase class 2 | EDD54_2377 | Not Available | Negative | 2555808 - 2556866 | 38685.9 |
| translation elongation factor p (ef-p) | EDD54_2378 | Not Available | Positive | 2556975 - 2557544 | 21058.2 |
| acyl dehydratase | EDD54_2379 | Not Available | Negative | 2557750 - 2558190 | 16103.1 |
| acyl dehydratase | EDD54_2380 | Not Available | Negative | 2558196 - 2558666 | 16284.2 |
| mraz protein | EDD54_2381 | Not Available | Positive | 2559215 - 2559685 | 17526.8 |
| 16s rrna (cytosine1402-n4)-methyltransferase | EDD54_2382 | Not Available | Positive | 2559682 - 2560686 | 35532.4 |
| hypothetical protein | EDD54_2383 | Not Available | Positive | 2560683 - 2561072 | 13991.8 |
| cell division protein ftsi (penicillin-binding protein 3) | EDD54_2384 | Not Available | Positive | 2561084 - 2562811 | 62363.5 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase /udp-n-acetylmuramoyl-tripeptide--d-alanyl-d-alanine ligase | EDD54_2385 | Not Available | Positive | 2562964 - 2565837 | 99802.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | EDD54_2386 | Not Available | Positive | 2565873 - 2566955 | 38233.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
