Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine transport system permease protein | EDD54_2201 | Not Available | Positive | 2368127 - 2369035 | 33446.8 |
| putrescine transport system permease protein | EDD54_2202 | Not Available | Positive | 2369048 - 2369872 | 29672.7 |
| iron(iii) transport system permease protein | EDD54_2203 | Not Available | Negative | 2370115 - 2371896 | 61645.1 |
| iron(iii) transport system substrate-binding protein | EDD54_2204 | Not Available | Negative | 2371908 - 2372927 | 36413.4 |
| hypothetical protein | EDD54_2205 | Not Available | Negative | 2373353 - 2373715 | 13184.7 |
| pas domain s-box-containing protein | EDD54_2206 | Not Available | Negative | 2373808 - 2378940 | 172395.0 |
| phasin | EDD54_2207 | Not Available | Positive | 2379200 - 2379583 | 14117.5 |
| phasin | EDD54_2208 | Not Available | Positive | 2379924 - 2380439 | 18406.8 |
| Trna-his | Not Available | Not Available | Positive | 2380654 - 2380730 | Not Available |
| hypothetical protein | EDD54_2210 | Not Available | Negative | 2380986 - 2381162 | 6520.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
