Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDD54_2161 | Not Available | Negative | 2325279 - 2325470 | 6779.62 |
| rna polymerase sigma-70 factor (ecf subfamily) | EDD54_2162 | Not Available | Positive | 2325694 - 2326185 | 18047.8 |
| hypothetical protein | EDD54_2163 | Not Available | Positive | 2326230 - 2326997 | 26072.9 |
| branched-chain amino acid aminotransferase | EDD54_2164 | Not Available | Positive | 2327103 - 2328059 | 34736.5 |
| nudix-type nucleoside diphosphatase (yffh/adpp family) | EDD54_2165 | Not Available | Positive | 2328067 - 2328678 | 21922.4 |
| abc-2 type transport system permease protein | EDD54_2166 | Not Available | Negative | 2328697 - 2329506 | 30496.3 |
| abc-2 type transport system atp-binding protein | EDD54_2167 | Not Available | Negative | 2329503 - 2330261 | 27317.0 |
| hypothetical protein | EDD54_2168 | Not Available | Negative | 2330333 - 2330572 | 9129.62 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | EDD54_2169 | Not Available | Positive | 2330979 - 2332187 | 44385.5 |
| pqq-dependent catabolism-associated beta-propeller protein | EDD54_2170 | Not Available | Positive | 2332253 - 2333227 | 35041.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
