Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | EDD54_2059 | Not Available | Positive | 2217521 - 2218036 | 19210.6 |
| hypothetical protein | EDD54_2060 | Not Available | Positive | 2218262 - 2218603 | 10835.7 |
| multidrug efflux pump | EDD54_2061 | Not Available | Negative | 2218696 - 2221791 | 109917.0 |
| membrane fusion protein (multidrug efflux system) | EDD54_2062 | Not Available | Negative | 2221788 - 2222948 | 40457.3 |
| tetr family transcriptional regulator | EDD54_2063 | Not Available | Positive | 2223091 - 2223666 | 19700.7 |
| sarcosine oxidase subunit beta | EDD54_2064 | Not Available | Positive | 2223869 - 2225122 | 45164.3 |
| sarcosine oxidase subunit delta | EDD54_2065 | Not Available | Positive | 2225171 - 2225467 | 10959.9 |
| sarcosine oxidase subunit alpha | EDD54_2066 | Not Available | Positive | 2225464 - 2228466 | 106151.0 |
| sarcosine oxidase subunit gamma | EDD54_2067 | Not Available | Positive | 2228459 - 2229043 | 20074.1 |
| arac family transcriptional regulator with amidase-like domain | EDD54_2068 | Not Available | Positive | 2229121 - 2230203 | 39568.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
