Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDD54_1979 | Not Available | Negative | 2140144 - 2140491 | 12413.0 |
| ribosomal large subunit pseudouridine synthase d | EDD54_1980 | Not Available | Positive | 2140590 - 2141633 | 37444.5 |
| rna polymerase rpoh-like sigma 32 subunit | EDD54_1981 | Not Available | Positive | 2141754 - 2142662 | 34280.1 |
| peroxiredoxin | EDD54_1982 | Not Available | Positive | 2143013 - 2143594 | 21596.1 |
| Trna-glu | Not Available | Not Available | Positive | 2143878 - 2143953 | Not Available |
| c4-dicarboxylate transporter dctm subunit | EDD54_1984 | Not Available | Negative | 2144358 - 2145683 | 46793.5 |
| c4-dicarboxylate transporter dctq subunit | EDD54_1985 | Not Available | Negative | 2145688 - 2146335 | 23468.9 |
| c4-dicarboxylate-binding protein dctp | EDD54_1986 | Not Available | Negative | 2146609 - 2147622 | 36665.0 |
| pas/pac sensor signal transduction histidine kinase | EDD54_1987 | Not Available | Positive | 2147779 - 2149782 | 72359.1 |
| luxr family two component transcriptional regulator | EDD54_1988 | Not Available | Positive | 2149779 - 2150408 | 22462.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
