Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase ycbb/ykud | EDD54_1917 | Not Available | Positive | 2073010 - 2074824 | 64483.6 |
| uncharacterized protein ycbk (duf882 family) | EDD54_1918 | Not Available | Positive | 2075360 - 2077123 | 61003.2 |
| hypothetical protein | EDD54_1919 | Not Available | Negative | 2077282 - 2077998 | 26472.5 |
| putative pig3 family nad(p)h quinone oxidoreductase | EDD54_1920 | Not Available | Negative | 2078150 - 2079145 | 34153.1 |
| uncharacterized small protein (duf1192 family) | EDD54_1921 | Not Available | Positive | 2079284 - 2079472 | 6862.21 |
| regulator of ctra degradation | EDD54_1922 | Not Available | Positive | 2079845 - 2080384 | 19908.7 |
| lsu ribosomal protein l31p | EDD54_1923 | Not Available | Negative | 2080526 - 2080750 | 8214.81 |
| atp-binding cassette subfamily b protein | EDD54_1924 | Not Available | Positive | 2081038 - 2082828 | 62270.4 |
| hypothetical protein | EDD54_1925 | Not Available | Negative | 2082857 - 2083216 | 12994.6 |
| tetr family transcriptional regulator | EDD54_1926 | Not Available | Negative | 2083288 - 2083920 | 23704.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
