Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | EDD54_1867 | Not Available | Negative | 2017364 - 2018365 | 35449.0 |
| glycerol-1-phosphate dehydrogenase | EDD54_1868 | Not Available | Positive | 2018570 - 2019913 | 47126.6 |
| hypothetical protein | EDD54_1869 | Not Available | Positive | 2019913 - 2020749 | 30165.1 |
| homodimeric glycerol 3-phosphate dehydrogenase (quinone) | EDD54_1870 | Not Available | Positive | 2020742 - 2022265 | 55797.8 |
| xylulokinase | EDD54_1871 | Not Available | Positive | 2022381 - 2023856 | 51574.5 |
| monosaccharide abc transporter substrate-binding protein (cut2 family) | EDD54_1872 | Not Available | Positive | 2023979 - 2024980 | 35563.2 |
| ribose transport system atp-binding protein/rhamnose transport system atp-binding protein | EDD54_1873 | Not Available | Positive | 2025049 - 2026575 | 53890.4 |
| monosaccharide abc transporter membrane protein (cut2 family) | EDD54_1874 | Not Available | Positive | 2026572 - 2027567 | 33825.9 |
| ribose transport system permease protein | EDD54_1875 | Not Available | Positive | 2027639 - 2028643 | 33711.1 |
| ribulokinase | EDD54_1876 | Not Available | Positive | 2028640 - 2030163 | 54276.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
