Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | EDD54_1392 | Not Available | Negative | 1500302 - 1500865 | 20894.2 |
| uridylate kinase | EDD54_1393 | Not Available | Negative | 1500968 - 1501684 | 25070.4 |
| hypothetical protein | EDD54_1394 | Not Available | Positive | 1501833 - 1502087 | 8685.13 |
| elongation factor ts | EDD54_1396 | Not Available | Negative | 1502539 - 1503465 | 31907.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1503809 - 1504191 | Not Available |
| small subunit ribosomal protein s2 | EDD54_1397 | Not Available | Negative | 1503683 - 1504465 | 28265.9 |
| putative flap endonuclease-1-like 5' dna nuclease | EDD54_1398 | Not Available | Negative | 1504647 - 1505324 | 23004.4 |
| hypothetical protein | EDD54_1399 | Not Available | Negative | 1505396 - 1505497 | 3694.53 |
| outer membrane protein ompa-like peptidoglycan-associated protein | EDD54_1400 | Not Available | Negative | 1505531 - 1507999 | 83455.1 |
| porin-like protein | EDD54_1401 | Not Available | Negative | 1508264 - 1509313 | 36528.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
