Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s12 methylthiotransferase accessory factor | EDD54_1291 | Not Available | Negative | 1384645 - 1385934 | 44471.6 |
| hypothetical protein | EDD54_1292 | Not Available | Negative | 1385939 - 1386304 | 13224.5 |
| dna-binding sarp family transcriptional activator | EDD54_1293 | Not Available | Negative | 1386429 - 1388411 | 72233.7 |
| hypothetical protein | EDD54_1294 | Not Available | Positive | 1388902 - 1389198 | 10473.2 |
| eal domain-containing protein (putative c-di-gmp-specific phosphodiesterase class i) | EDD54_1295 | Not Available | Negative | 1389358 - 1390965 | 57852.5 |
| hypothetical protein | EDD54_1296 | Not Available | Positive | 1391267 - 1392424 | 39619.0 |
| hypothetical protein | EDD54_1297 | Not Available | Positive | 1392696 - 1394852 | 75909.3 |
| aspartyl-trna synthetase | EDD54_1298 | Not Available | Negative | 1395157 - 1396938 | 66541.3 |
| ribonuclease d | EDD54_1299 | Not Available | Positive | 1397213 - 1398400 | 43932.5 |
| polyphosphate kinase | EDD54_1301 | Not Available | Negative | 1400205 - 1402421 | 82412.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
