Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-dependent oxidoreductase (nitrilotriacetate monooxygenase family) | EDD54_1271 | Not Available | Positive | 1362840 - 1364153 | 47747.1 |
| polar amino acid transport system substrate-binding protein | EDD54_1272 | Not Available | Positive | 1364194 - 1365027 | 30317.6 |
| amino acid abc transporter substrate-binding protein (paat family) | EDD54_1273 | Not Available | Positive | 1365225 - 1366070 | 30675.3 |
| amino acid abc transporter membrane protein 1 (paat family) | EDD54_1274 | Not Available | Positive | 1366150 - 1366848 | 24805.1 |
| polar amino acid transport system permease protein/octopine/nopaline transport system permease protein/arginine/ornithine transport system permease protein | EDD54_1275 | Not Available | Positive | 1366845 - 1367654 | 29122.1 |
| amino acid abc transporter atp-binding protein (paat family) | EDD54_1276 | Not Available | Positive | 1367651 - 1368430 | 28508.9 |
| mate family multidrug resistance protein | EDD54_1277 | Not Available | Positive | 1368803 - 1370278 | 50531.6 |
| drug/metabolite transporter (dmt)-like permease | EDD54_1278 | Not Available | Positive | 1370275 - 1371369 | 38387.5 |
| hypothetical protein | EDD54_1279 | Not Available | Negative | 1372555 - 1372923 | 13701.2 |
| hypothetical protein | EDD54_1280 | Not Available | Negative | 1373228 - 1373605 | 13826.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
