Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Pleomorphomonadaceae
Genus
Oharaeibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Pleomorphomonadaceae |
| Genus | Oharaeibacter |
| Species | Oharaeibacter diazotrophicus |
| Strain | DSM 102969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rice rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713704 bp
Thymine Count
703491 bp
Guanine Count
1795972 bp
Cytosine Count
1778725 bp
Genome Length
4991892 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDD54_1048 | Not Available | Negative | 1138292 - 1138579 | 10324.1 |
| anti-sigma factor rsiw | EDD54_1049 | Not Available | Negative | 1138625 - 1139413 | 27992.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | EDD54_1050 | Not Available | Negative | 1139400 - 1139930 | 19338.1 |
| uncharacterized membrane protein hded (duf308 family) | EDD54_1051 | Not Available | Positive | 1140174 - 1141511 | 48542.3 |
| putative mfs family arabinose efflux permease | EDD54_1052 | Not Available | Positive | 1141508 - 1142662 | 39362.8 |
| methyltransferase family protein | EDD54_1053 | Not Available | Negative | 1142693 - 1143475 | 27499.4 |
| anti-sigma b factor antagonist/stage ii sporulation protein aa (anti-sigma f factor antagonist) | EDD54_1054 | Not Available | Positive | 1143734 - 1144060 | 11505.1 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | EDD54_1055 | Not Available | Negative | 1144064 - 1146013 | 67538.1 |
| serine/threonine-protein kinase rsbw | EDD54_1056 | Not Available | Negative | 1146010 - 1146450 | 15159.9 |
| amino acid abc transporter membrane protein 2 (paat family) | EDD54_1057 | Not Available | Negative | 1146458 - 1147150 | 24709.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
