Sphingomonas sp. S-NIH.Pt15_0812

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. S-NIH.Pt15_0812 is a rod-shaped bacterium characterized by the presence of flagella, which enable motility. This species possesses a single replicon, indicative of a streamlined genomic organization that may facilitate efficient replication and function. The strain is cataloged under the accession number QLJH00000000.1, allowing for its identification and classification within genomic databases. The genus Sphingomonas is known for its diverse metabolic capabilities, often thriving in various environments, including soil and aquatic habitats. While specific ecological roles of Sphingomonas sp. S-NIH.Pt15_0812 are not detailed, members of this genus are typically associated with the degradation of complex organic compounds, which suggests a potential role in bioremediation processes. The combination of its rod shape and flagella presence likely supports its adaptability and survival in fluctuating environments. Overall, Sphingomonas sp. S-NIH.Pt15_0812 exemplifies the versatility and ecological significance of the Sphingomonas genus, contributing to nutrient cycling and the degradation of pollutants in natural ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. S-NIH.Pt15_0812
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. S-NIH.Pt15_0812
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. S-NIH.Pt15_0812 NODE_110, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3413 genes

Non-Coding Genes

465 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine hydrolaseBRX43_12580Not AvailableNegative2667863 - 266845921605.8
30s ribosomal protein s12 methylthiotransferase rimoBRX43_12585Not AvailableNegative2668526 - 266986348551.2
anhydro-n-acetylmuramic acid kinaseBRX43_12590Not AvailablePositive2669947 - 267105037339.5
vwa domain-containing proteinBRX43_12595Not AvailableNegative2671273 - 267245144740.3
30s ribosomal protein s9BRX43_12600Not AvailableNegative2672549 - 267309419817.5
50s ribosomal protein l13BRX43_12605Not AvailableNegative2673094 - 267357317561.6
heme a synthaseBRX43_12610Not AvailableNegative2673692 - 267475337890.4
hypothetical proteinBRX43_12615Not AvailableNegative2675146 - 267548712049.4
copg family transcriptional regulatorBRX43_12620Not AvailablePositive2676067 - 26762978591.02
type ii toxin-antitoxin system pemk/mazf family toxinBRX43_12625Not AvailablePositive2676333 - 267663511002.3

Displaying genes 2521 – 2530 of 3878 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.