Sphingomonas sp. S-NIH.Pt1_0416

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. S-NIH.Pt1_0416 is a rod-shaped bacterium belonging to the genus Sphingomonas. This organism is characterized by the presence of flagella, which suggests that it has the capability for motility, allowing it to navigate through various environments. The genomic structure of Sphingomonas sp. S-NIH.Pt1_0416 consists of a single replicon, indicating a relatively simple genomic organization compared to species with multiple replicons. The accession number for this bacterium is QLJL00000000.1, which serves as a unique identifier for its genomic data in biological databases. This can be useful for researchers looking to access specific genetic information related to Sphingomonas sp. S-NIH.Pt1_0416 or for comparative studies with other Sphingomonas species. In terms of biological and ecological insight, members of the Sphingomonas genus are often recognized for their roles in bioremediation and the degradation of environmental pollutants due to their metabolic versatility. The presence of flagella in Sphingomonas sp. S-NIH.Pt1_0416 may enhance its ability to colonize diverse habitats, potentially allowing it to contribute to the breakdown of organic compounds in various ecosystems. Understanding the traits of Sphingomonas sp. S-NIH.Pt1_0416 can provide valuable information on its ecological roles and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. S-NIH.Pt1_0416
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. S-NIH.Pt1_0416
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. S-NIH.Pt1_0416 NODE_138, whole genome shotgun

Gene Summary

Adenine Count

788106 bp

Thymine Count

790191 bp

Guanine Count

1502047 bp

Cytosine Count

1487865 bp

Genome Length

4568209 bp

Protein-coding Genes

4108 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cob(i)yrinic acid a,c-diamide adenosyltransferaseBRX36_06770Not AvailableNegative1476835 - 147743721984.6
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseBRX36_06775Not AvailableNegative1477434 - 147795818636.3
threonine-phosphate decarboxylaseBRX36_06780Not AvailablePositive1478001 - 147897534347.2
cobalamin biosynthesis protein cobdBRX36_06785Not AvailablePositive1478968 - 147990633865.5
cobyric acid synthaseBRX36_06790Not AvailablePositive1479894 - 148134850379.1
adenosylcobinamide-gdp ribazoletransferaseBRX36_06795Not AvailableNegative1481333 - 148204924732.3
histidine phosphatase family proteinBRX36_06800Not AvailableNegative1482046 - 148260319905.8
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseBRX36_06805Not AvailableNegative1482600 - 148361033557.6
duf1636 domain-containing proteinBRX36_06810Not AvailableNegative1483607 - 148401414674.5
s9 family peptidaseBRX36_06815Not AvailableNegative1484354 - 148661883887.3

Displaying genes 1371 – 1380 of 4194 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.