Sphingomonas sp. S-NIH.Pt1_0416

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. S-NIH.Pt1_0416 is a rod-shaped bacterium belonging to the genus Sphingomonas. This organism is characterized by the presence of flagella, which suggests that it has the capability for motility, allowing it to navigate through various environments. The genomic structure of Sphingomonas sp. S-NIH.Pt1_0416 consists of a single replicon, indicating a relatively simple genomic organization compared to species with multiple replicons. The accession number for this bacterium is QLJL00000000.1, which serves as a unique identifier for its genomic data in biological databases. This can be useful for researchers looking to access specific genetic information related to Sphingomonas sp. S-NIH.Pt1_0416 or for comparative studies with other Sphingomonas species. In terms of biological and ecological insight, members of the Sphingomonas genus are often recognized for their roles in bioremediation and the degradation of environmental pollutants due to their metabolic versatility. The presence of flagella in Sphingomonas sp. S-NIH.Pt1_0416 may enhance its ability to colonize diverse habitats, potentially allowing it to contribute to the breakdown of organic compounds in various ecosystems. Understanding the traits of Sphingomonas sp. S-NIH.Pt1_0416 can provide valuable information on its ecological roles and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. S-NIH.Pt1_0416
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. S-NIH.Pt1_0416
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. S-NIH.Pt1_0416 NODE_138, whole genome shotgun

Gene Summary

Adenine Count

788106 bp

Thymine Count

790191 bp

Guanine Count

1502047 bp

Cytosine Count

1487865 bp

Genome Length

4568209 bp

Protein-coding Genes

4108 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tryptophan--trna ligaseBRX36_05345Not AvailablePositive1169583 - 117059036789.5
aaa family atpaseBRX36_05350Not AvailablePositive1170590 - 117112019908.1
chromosomal replication initiator protein dnaaBRX36_05355Not AvailableNegative1171243 - 117278756794.5
30s ribosomal protein s20BRX36_05360Not AvailableNegative1173263 - 11735269492.75
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseBRX36_05365Not AvailableNegative1173614 - 117442930073.3
class i sam-dependent methyltransferaseBRX36_05370Not AvailablePositive1174535 - 117526627075.5
2-polyprenylphenol 6-hydroxylaseBRX36_05375Not AvailablePositive1175304 - 117683956304.4
hypothetical proteinBRX36_05380Not AvailablePositive1176842 - 117794838470.8
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcBRX36_05385Not AvailablePositive1177945 - 117913841533.1
dutp diphosphataseBRX36_05390Not AvailablePositive1179135 - 117958415367.6

Displaying genes 1091 – 1100 of 4194 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.