Leclercia sp. LSNIH1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Leclercia

Description

Leclercia sp. LSNIH1 is characterized by having three replicons, which is noteworthy for its genomic structure. The organism is represented in several genomic databases with the following accessions: NZ_CP026169.1, NZ_CP026168.1, and NZ_CP026171.1. These accessions correspond to different components of its genomic architecture, potentially reflecting a complex genetic makeup. Leclercia is a genus within the Enterobacteriaceae family, and members of this genus are typically associated with various environments, including soil and water. The presence of multiple replicons in Leclercia sp. LSNIH1 suggests an adaptability that may facilitate its survival and metabolic versatility in diverse conditions. This genetic arrangement may allow for a range of functions, possibly enhancing the organism's ability to utilize various substrates or resist environmental stressors. Additionally, the presence of multiple replicons can have implications for horizontal gene transfer, a phenomenon that can increase genetic diversity and adaptability in microbial populations. In terms of ecological significance, the traits of Leclercia sp. LSNIH1, particularly its replicon structure, may position it as a potential player in biogeochemical cycles, especially in environments where it can thrive alongside other microorganisms. Understanding its genomic traits could provide insights into the ecological roles of Leclercia sp. and its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusLeclercia
SpeciesLeclercia sp. LSNIH1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Leclercia sp. LSNIH1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leclercia sp. LSNIH1 plasmid pLEC-b38d, complete sequence.

Gene Summary

Adenine Count

12457 bp

Thymine Count

12296 bp

Guanine Count

13239 bp

Cytosine Count

12630 bp

Genome Length

50622 bp

Protein-coding Genes

49 genes

Non-Coding Genes

13 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
virb3 family type iv secretion system proteinC2U54_RS24385Not AvailablePositive49473 - 4979012264.4
virb4 family type iv secretion/conjugal transfer atpaseC2U54_RS24390Not AvailablePositive49790 - 5239099385.6
type iv secretion system proteinC2U54_RS24395Not AvailablePositive52408 - 5312125935.9
incn-type entry exclusion lipoprotein eexnC2U54_RS24400Not AvailablePositive53129 - 533568729.58
type iv secretion system proteinC2U54_RS24405Not AvailablePositive53372 - 5441234966.7
conjugal transfer protein tranC2U54_RS28015Not AvailablePositive54513 - 546414332.06
virb8 family proteinC2U54_RS24415Not AvailablePositive54631 - 5532926474.6
trbg/virb9 family p-type conjugative transfer proteinC2U54_RS24420Not AvailablePositive55340 - 5622432824.2
type iv secretion system protein virb10C2U54_RS24425Not AvailablePositive56224 - 5738440897.6
atpase, t2ss/t4p/t4ss familyC2U54_RS24430Not AvailablePositive57426 - 5842136858.8

Displaying genes 491 – 500 of 500 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.