Paracandidimonas soli str. DSM 100048

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Paracandidimonas

Description

Paracandidimonas soli strain DSM 100048 is a Gram-negative, rod-shaped bacterium with a facultative aerobe/anaerobe oxygen requirement. This organism thrives optimally at a temperature of 25°C, placing it within the mesophilic range, which is typically between 20°C and 45°C. Notably, Paracandidimonas soli is non-spore-forming, indicating that it does not produce spores as a means of survival under unfavorable conditions. The strain is characterized by having a single replicon, suggesting a streamlined genomic organization that may influence its metabolic capabilities and adaptability. The accession number for Paracandidimonas soli strain DSM 100048 is SMBX00000000.1, providing a reference for researchers interested in studying its genetic and phenotypic properties. In terms of ecological insights, the facultative anaerobic nature of Paracandidimonas soli suggests that it can thrive in varying oxygen levels, which may allow it to occupy diverse ecological niches. This adaptability could play a significant role in its interactions within microbial communities, particularly in environments where oxygen availability fluctuates. Furthermore, its mesophilic growth range indicates its potential presence in soil and other moderate-temperature habitats, contributing to nutrient cycling and influencing the microbial dynamics of its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusParacandidimonas
SpeciesParacandidimonas soli
StrainDSM 100048

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracandidimonas soli strain DSM 100048 Ga0310543_123, whole

Gene Summary

Adenine Count

713337 bp

Thymine Count

745778 bp

Guanine Count

1256498 bp

Cytosine Count

1177097 bp

Genome Length

3892807 bp

Protein-coding Genes

3513 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Baseplate assembly protein vEV686_10393Not AvailablePositive1584925 - 158556622505.3
Baseplate wedge subunitEV686_10394Not AvailablePositive1585563 - 158592813189.0
Baseplate assembly proteinEV686_10395Not AvailablePositive1585925 - 158685134285.8
Phage tail protein gpiEV686_10396Not AvailablePositive1586854 - 158748023200.9
Tail fiber proteinEV686_10397Not AvailablePositive1587477 - 158866442645.4
Tail fiber assembly-like proteinEV686_10398Not AvailablePositive1590922 - 159172829822.9
Dam modification methylaseEV686_10399Not AvailablePositive1591869 - 159263329128.3
Putative integraseEV686_103100Not AvailableNegative1592653 - 159354334712.8
Putative tail sheath proteinEV686_103101Not AvailablePositive1593889 - 159507343014.7
Tail core proteinEV686_103102Not AvailablePositive1595133 - 159564218723.8

Displaying genes 21 – 30 of 3687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

15 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0002715(6S)-5-formyl-5,6,7,8-tetrahydrofolateC20H21N7O7Chemical structure of (6S)-5-formyl-5,6,7,8-tetrahydrofolateNot available
Average471.431Da
Monoisotopic471.1513432Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003334aldehydo-D-ribose 5-phosphateC5H11O8PChemical structure of aldehydo-D-ribose 5-phosphateNot available
Average230.1098Da
Monoisotopic230.0191538Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003701L-methionine (S)-S-oxideC5H11NO3SChemical structure of L-methionine (S)-S-oxide62697-73-8
Average165.21Da
Monoisotopic165.045964392Da

Displaying 1–10 of 15 metabolites

Health Effects

No health effects information available for this bacterium.