Alteromonadaceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Description

Alteromonadaceae bacterium is a member of the Alteromonadaceae family, characterized by having a total of six replicons. The genomic data for this organism is represented by multiple accessions, including NZSW00000000.1, PBCZ00000000.1, PBYW00000000.1, NVXL00000000.1, NYWN00000000.1, and NZOQ00000000.1. The presence of multiple replicons may suggest a complex genetic organization, which is often associated with adaptability and survival in diverse environments. Members of the Alteromonadaceae family are typically found in marine environments, indicating that this bacterium may play a role in the oceanic ecosystem. Alteromonadaceae bacteria are known for their ability to degrade organic matter and contribute to nutrient cycling within marine systems. Their ecological role may involve the breakdown of complex substrates, which can enhance the availability of nutrients for other organisms. This suggests that Alteromonadaceae bacterium could be significant in maintaining the health and balance of marine ecosystems, particularly in nutrient-poor conditions where organic matter plays a crucial role in supporting diverse microbial communities. In summary, the genomic infrastructure characterized by six replicons may provide insights into the organism's adaptability and ecological contributions to marine environments, particularly in organic matter degradation and nutrient cycling.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Alteromonadaceae bacterium isolate CPC17 MHASMcontig_256863,

Gene Summary

Adenine Count

1378406 bp

Thymine Count

1375926 bp

Guanine Count

1095887 bp

Cytosine Count

1097464 bp

Genome Length

4947698 bp

Protein-coding Genes

4140 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv pili twitching motility protein piltCL579_13355Not AvailablePositive3106328 - 310737138615.8
type iv pili twitching motility protein piltCL579_13360Not AvailablePositive3107404 - 310851640753.3
duf2007 domain-containing proteinCL579_13365Not AvailablePositive3108552 - 310886011753.8
site-specific tyrosine recombinase xerdCL579_13370Not AvailablePositive3108850 - 310975534021.6
bifunctional protein-disulfide isomerase/oxidoreductase dsbcCL579_13375Not AvailablePositive3109901 - 311062926666.7
single-stranded-dna-specific exonuclease recjCL579_13380Not AvailablePositive3110710 - 311242863038.3
hypothetical proteinCL579_13385Not AvailablePositive3112528 - 311280911010.2
dna repair protein recoCL579_13390Not AvailablePositive3112867 - 311358926719.3
pyridoxine 5'-phosphate synthaseCL579_13395Not AvailablePositive3113586 - 311432326692.9
holo-acp synthaseCL579_13400Not AvailablePositive3114338 - 311471813888.7

Displaying genes 2611 – 2620 of 25307 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

212 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da

Displaying 1–10 of 212 metabolites

Health Effects

No health effects information available for this bacterium.