Thioclava sp. L04-15

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava sp. L04-15 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genomic structure, which is often associated with specific ecological adaptations. The genomic data for Thioclava sp. L04-15 is cataloged under the accession number MPZW00000000.1. The Gram-negative classification of Thioclava sp. L04-15 suggests that it has a distinctive cell wall structure, characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides. This structural feature can influence its interactions with the environment, including its resistance to certain antibiotics and its ability to thrive in various ecological niches. The presence of a single replicon may also play a role in the organism's efficiency in replication and adaptation to its surroundings. This trait could indicate a potential for rapid growth and reproduction under favorable conditions, which is a significant consideration in ecological studies related to microbial dynamics. In summary, Thioclava sp. L04-15 exhibits traits typical of Gram-negative, rod-shaped bacteria with a single replicon. These characteristics may suggest specific ecological roles, such as interactions within microbial communities or adaptations to particular environments. Understanding such traits can provide insights into the ecological functions of this bacterium and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava sp. L04-15
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava sp. L04-15 contig30, whole genome shotgun sequence.

Gene Summary

Adenine Count

699953 bp

Thymine Count

691277 bp

Guanine Count

1220393 bp

Cytosine Count

1246471 bp

Genome Length

3858094 bp

Protein-coding Genes

3601 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
antifreeze proteinBMI90_13035Not AvailablePositive2670365 - 267149540566.6
primosomal protein n' (replication factor y) - superfamily ii helicaseBMI90_13040Not AvailablePositive2671518 - 267264241804.6
hypothetical proteinBMI90_13045Not AvailableNegative2672650 - 26728296755.11
thiol reductase thioredoxinBMI90_13050Not AvailablePositive2672899 - 267334215753.2
Trna-alaNot AvailableNot AvailablePositive2673438 - 2673513Not Available
diacylglyceryl transferaseBMI90_13060Not AvailablePositive2673801 - 267430419021.3
pyrroline-5-carboxylate reductaseBMI90_13065Not AvailablePositive2674332 - 267514427622.5
pp_02580BMI90_13070Not AvailablePositive2675141 - 2675476Not Available
d-glycerate dehydrogenaseBMI90_13075Not AvailablePositive2675476 - 267642333726.5
beta-ketoacyl-acp synthase iiiBMI90_13080Not AvailablePositive2676466 - 267758441008.7

Displaying genes 2591 – 2600 of 3674 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.