Thioclava sp. L04-15

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava sp. L04-15 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genomic structure, which is often associated with specific ecological adaptations. The genomic data for Thioclava sp. L04-15 is cataloged under the accession number MPZW00000000.1. The Gram-negative classification of Thioclava sp. L04-15 suggests that it has a distinctive cell wall structure, characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides. This structural feature can influence its interactions with the environment, including its resistance to certain antibiotics and its ability to thrive in various ecological niches. The presence of a single replicon may also play a role in the organism's efficiency in replication and adaptation to its surroundings. This trait could indicate a potential for rapid growth and reproduction under favorable conditions, which is a significant consideration in ecological studies related to microbial dynamics. In summary, Thioclava sp. L04-15 exhibits traits typical of Gram-negative, rod-shaped bacteria with a single replicon. These characteristics may suggest specific ecological roles, such as interactions within microbial communities or adaptations to particular environments. Understanding such traits can provide insights into the ecological functions of this bacterium and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava sp. L04-15
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava sp. L04-15 contig30, whole genome shotgun sequence.

Gene Summary

Adenine Count

699953 bp

Thymine Count

691277 bp

Guanine Count

1220393 bp

Cytosine Count

1246471 bp

Genome Length

3858094 bp

Protein-coding Genes

3601 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
capsule biosynthesis protein capaBMI90_09500Not AvailablePositive1931182 - 193246849333.5
sugar abc transporter substrate-binding proteinBMI90_09505Not AvailablePositive1932549 - 193367940075.2
beta-3-deoxy-d-manno-oct-2-ulosonic acid transferaseBMI90_09510Not AvailablePositive1933679 - 193569774319.1
riboflavin biosynthesis protein ribdBMI90_09515Not AvailableNegative1935667 - 193674637881.9
transcriptional regulator nrdrBMI90_09520Not AvailableNegative1936767 - 193723717906.5
secondary thiamine-phosphate synthaseBMI90_09525Not AvailableNegative1937379 - 193779515659.8
hypothetical proteinBMI90_09530Not AvailableNegative1937795 - 193810911125.6
hypothetical proteinBMI90_09535Not AvailableNegative1938183 - 193855413378.0
rna polymerase sigma factor rpodBMI90_09540Not AvailableNegative1938606 - 194060074911.7
dna primaseBMI90_09545Not AvailableNegative1940784 - 194273671642.2

Displaying genes 1911 – 1920 of 3674 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.