Thioclava sp. DLFJ5-1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava sp. DLFJ5-1 is a Gram-negative bacterium characterized by its rod shape. This organism possesses a single replicon, which indicates a relatively simple genetic structure compared to those with multiple replicons. The genomic data for Thioclava sp. DLFJ5-1 is available under the accession number MPZU00000000.1, which provides a reference for further research and analysis. The classification of Thioclava sp. within the broader context of microbial ecology suggests it may play specific roles in its environment, although detailed ecological interactions are not specified in the provided data. The Gram-negative status indicates the presence of an outer membrane, which can influence its interaction with other organisms, its susceptibility to antibiotics, and its overall ecological niche. Given the limited information, the ecological implications of Thioclava sp. DLFJ5-1 can be inferred to include potential contributions to nutrient cycling or interactions with other microbial communities, characteristic of many bacteria in similar environments. Understanding such traits is crucial for comprehending the broader ecological roles of Thioclava sp. and similar microorganisms in their habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava sp. DLFJ5-1
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava sp. DLFJ5-1 contig14, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4022 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydroxy-acid dehydrataseBMI86_03980Not AvailablePositive815677 - 81751265370.4
hypothetical proteinBMI86_03985Not AvailableNegative817565 - 81863237476.7
hypothetical proteinBMI86_03990Not AvailableNegative818687 - 81951729709.9
pyruvate oxidaseBMI86_03995Not AvailableNegative819864 - 82157961665.4
fmn-binding glutamate synthase family proteinBMI86_04000Not AvailableNegative821581 - 82323659888.5
hypothetical proteinBMI86_04005Not AvailableNegative823262 - 8234476454.56
multidrug efflux rnd transporter permeaseBMI86_04010Not AvailableNegative823620 - 826706108727.0
efflux transporter periplasmic adaptor subunitBMI86_04015Not AvailableNegative826714 - 82791041644.0
2',3'-cyclic-nucleotide 2'-phosphodiesteraseBMI86_04020Not AvailableNegative828250 - 83022671653.9
oligopeptide abc transporter atp-binding protein oppfBMI86_04025Not AvailableNegative830368 - 83138137272.6

Displaying genes 851 – 860 of 4111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.