Thioclava sp. DLFJ5-1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava sp. DLFJ5-1 is a Gram-negative bacterium characterized by its rod shape. This organism possesses a single replicon, which indicates a relatively simple genetic structure compared to those with multiple replicons. The genomic data for Thioclava sp. DLFJ5-1 is available under the accession number MPZU00000000.1, which provides a reference for further research and analysis. The classification of Thioclava sp. within the broader context of microbial ecology suggests it may play specific roles in its environment, although detailed ecological interactions are not specified in the provided data. The Gram-negative status indicates the presence of an outer membrane, which can influence its interaction with other organisms, its susceptibility to antibiotics, and its overall ecological niche. Given the limited information, the ecological implications of Thioclava sp. DLFJ5-1 can be inferred to include potential contributions to nutrient cycling or interactions with other microbial communities, characteristic of many bacteria in similar environments. Understanding such traits is crucial for comprehending the broader ecological roles of Thioclava sp. and similar microorganisms in their habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava sp. DLFJ5-1
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava sp. DLFJ5-1 contig14, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4022 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein eBMI86_20465Not AvailableNegative4233433 - 423446737351.9
conjugal transfer proteinBMI86_20470Not AvailableNegative4234469 - 423579446312.6
conjugal transfer protein trbgBMI86_20475Not AvailableNegative4235791 - 423638421883.6
hypothetical proteinBMI86_20480Not AvailableNegative4236489 - 423713623868.5
conjugal transfer protein trafBMI86_20485Not AvailableNegative4237151 - 423794828275.6
lytic transglycosylaseBMI86_20490Not AvailableNegative4237945 - 423911141503.2
hypothetical proteinBMI86_20495Not AvailableNegative4239116 - 42393317435.99
type iv secretion system protein b4BMI86_20500Not AvailableNegative4239328 - 424171286995.2
type iv secretion system protein virb3BMI86_20505Not AvailableNegative4241702 - 424198010359.8
virb2 type iv secretionBMI86_20510Not AvailableNegative4242002 - 424231610764.6

Displaying genes 4031 – 4040 of 4111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.