Silvanigrella aquatica str. Nonnen-W8red

Kingdom

Pseudomonadati

Phylum

Bdellovibrionota

Class

Oligoflexia

Order

Silvanigrellales

Family

Silvanigrellaceae

Genus

Silvanigrella

Description

Silvanigrella aquatica str. Nonnen-W8red is characterized by having a single replicon, indicating a simpler genomic structure compared to organisms with multiple replicons. The strain is associated with accession number NZ_CP017835.1, which provides a reference point for genetic and taxonomic studies. The presence of only one replicon may suggest a streamlined genetic organization, which can be beneficial for adaptability in varying aquatic environments. This trait could facilitate quicker replication and response to environmental changes, potentially enhancing the strain's survival and ecological fitness in its habitat. From an ecological perspective, the unique genetic features of Silvanigrella aquatica str. Nonnen-W8red may contribute to its role within aquatic ecosystems. The strain's streamlined genome might allow it to exploit specific niches or resources efficiently, potentially impacting microbial community dynamics. Understanding its genomic characteristics could provide insights into its functional capabilities and ecological interactions in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumBdellovibrionota
ClassOligoflexia
OrderSilvanigrellales
FamilySilvanigrellaceae
GenusSilvanigrella
SpeciesSilvanigrella aquatica
StrainNonnen-W8red

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Silvanigrella aquatica str. Nonnen-W8red


Gene Summary

Adenine Count

14812 bp

Thymine Count

14958 bp

Guanine Count

6045 bp

Cytosine Count

6413 bp

Genome Length

42228 bp

Protein-coding Genes

47 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAXG55_RS14325Not AvailableNegative1 - 210575137.3
type iv secretion system dna-binding domain-containing proteinAXG55_RS14330Not AvailableNegative2148 - 428080819.4
hypothetical proteinAXG55_RS14335Not AvailableNegative4706 - 722296431.9
virb3 family type iv secretion system proteinAXG55_RS14340Not AvailableNegative7271 - 758212170.0
trbc/virb2 family proteinAXG55_RS14345Not AvailableNegative7597 - 790810906.5
p-type conjugative transfer atpase trbbAXG55_RS14350Not AvailableNegative7927 - 886535139.2
hypothetical proteinAXG55_RS14355Not AvailableNegative8890 - 939018959.3
lytic transglycosylase domain-containing proteinAXG55_RS14360Not AvailablePositive9466 - 993917582.1
trbi/virb10 family proteinAXG55_RS14365Not AvailableNegative9948 - 1104540050.3
trbg/virb9 family p-type conjugative transfer proteinAXG55_RS14370Not AvailableNegative11056 - 1207238780.8

Displaying genes 1 – 10 of 47 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.