Silvanigrella aquatica str. Nonnen-W8red

Kingdom

Pseudomonadati

Phylum

Bdellovibrionota

Class

Oligoflexia

Order

Silvanigrellales

Family

Silvanigrellaceae

Genus

Silvanigrella

Description

Silvanigrella aquatica str. Nonnen-W8red is characterized by having a single replicon, indicating a simpler genomic structure compared to organisms with multiple replicons. The strain is associated with accession number NZ_CP017835.1, which provides a reference point for genetic and taxonomic studies. The presence of only one replicon may suggest a streamlined genetic organization, which can be beneficial for adaptability in varying aquatic environments. This trait could facilitate quicker replication and response to environmental changes, potentially enhancing the strain's survival and ecological fitness in its habitat. From an ecological perspective, the unique genetic features of Silvanigrella aquatica str. Nonnen-W8red may contribute to its role within aquatic ecosystems. The strain's streamlined genome might allow it to exploit specific niches or resources efficiently, potentially impacting microbial community dynamics. Understanding its genomic characteristics could provide insights into its functional capabilities and ecological interactions in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumBdellovibrionota
ClassOligoflexia
OrderSilvanigrellales
FamilySilvanigrellaceae
GenusSilvanigrella
SpeciesSilvanigrella aquatica
StrainNonnen-W8red

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Silvanigrella aquatica str. Nonnen-W8red


Gene Summary

Adenine Count

14812 bp

Thymine Count

14958 bp

Guanine Count

6045 bp

Cytosine Count

6413 bp

Genome Length

42228 bp

Protein-coding Genes

47 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
virb8/trbf family proteinAXG55_RS14375Not AvailableNegative12089 - 1276325673.3
p-type conjugative transfer protein trblAXG55_RS14380Not AvailableNegative12787 - 1422050414.4
conjugative transfer signal peptidase trafAXG55_RS14385Not AvailableNegative14223 - 1475620685.5
rcc1 domain-containing proteinAXG55_RS14390Not AvailableNegative14764 - 1590039752.9
hypothetical proteinAXG55_RS14395Not AvailableNegative15904 - 161047698.18
hypothetical proteinAXG55_RS14400Not AvailableNegative16126 - 1679725268.9
helix-turn-helix domain-containing proteinAXG55_RS14405Not AvailablePositive17223 - 1785524967.1
acyl-coa thioesteraseAXG55_RS14410Not AvailablePositive17842 - 1827916861.8
hypothetical proteinAXG55_RS14415Not AvailableNegative18272 - 1885322840.4
sdr family oxidoreductaseAXG55_RS14420Not AvailableNegative18866 - 1963027867.8

Displaying genes 11 – 20 of 47 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.