Roseivirga seohaensis str. SW-152

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Roseivirgaceae

Genus

Roseivirga

Description

Roseivirga seohaensis str. SW-152 is a Gram-negative, rod-shaped bacterium. It is characterized by having a single replicon, which is a crucial feature for its genomic structure and replication process. The strain has been sequenced, and its genomic information is available under the accession number LRPB00000000.1. Gram-negative bacteria, such as Roseivirga seohaensis, are known for their unique cell wall structure, which includes an outer membrane containing lipopolysaccharides. This feature often contributes to their environmental adaptability and resistance to certain antibiotics. The rod shape of the organism may also play a role in its motility and ability to colonize various environments. The ecological significance of Roseivirga seohaensis str. SW-152 may be related to its potential roles in marine ecosystems, as members of the genus Roseivirga are commonly found in marine environments. They are often associated with the degradation of organic matter and nutrient cycling. Understanding the traits of this particular strain can provide insights into its ecological interactions and contributions to marine microbial communities. The genomic data available may also facilitate further research into its metabolic pathways and functions, potentially revealing its role in biogeochemical processes in marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyRoseivirgaceae
GenusRoseivirga
SpeciesRoseivirga seohaensis
StrainSW-152

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseivirga seohaensis strain SW-152 contig_9, whole genome shotgun

Gene Summary

Adenine Count

1270053 bp

Thymine Count

1255299 bp

Guanine Count

810009 bp

Cytosine Count

824969 bp

Genome Length

4160330 bp

Protein-coding Genes

3614 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAWW67_17850Not AvailableNegative1048957 - 104928011992.5
dna-directed rna polymerase subunit beta'AWW67_17855Not AvailableNegative1049284 - 1053597160556.0
dna-directed rna polymerase subunit betaAWW67_17860Not AvailableNegative1053640 - 1057512145025.0
50s ribosomal protein l7/l12AWW67_17865Not AvailableNegative1057689 - 105806912915.4
50s ribosomal protein l10AWW67_17870Not AvailableNegative1058110 - 105864319392.6
50s ribosomal protein l1AWW67_17875Not AvailableNegative1058646 - 105934424950.2
50s ribosomal protein l11AWW67_17880Not AvailableNegative1059357 - 105980015893.6
antitermination protein nusgAWW67_17885Not AvailableNegative1059803 - 106036321452.8
preprotein translocaseAWW67_17890Not AvailableNegative1060372 - 10605667420.18
Trna-trpNot AvailableNot AvailablePositive1060585 - 1060660Not Available

Displaying genes 961 – 970 of 3657 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.