Roseivirga seohaensis str. SW-152

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Roseivirgaceae

Genus

Roseivirga

Description

Roseivirga seohaensis str. SW-152 is a Gram-negative, rod-shaped bacterium. It is characterized by having a single replicon, which is a crucial feature for its genomic structure and replication process. The strain has been sequenced, and its genomic information is available under the accession number LRPB00000000.1. Gram-negative bacteria, such as Roseivirga seohaensis, are known for their unique cell wall structure, which includes an outer membrane containing lipopolysaccharides. This feature often contributes to their environmental adaptability and resistance to certain antibiotics. The rod shape of the organism may also play a role in its motility and ability to colonize various environments. The ecological significance of Roseivirga seohaensis str. SW-152 may be related to its potential roles in marine ecosystems, as members of the genus Roseivirga are commonly found in marine environments. They are often associated with the degradation of organic matter and nutrient cycling. Understanding the traits of this particular strain can provide insights into its ecological interactions and contributions to marine microbial communities. The genomic data available may also facilitate further research into its metabolic pathways and functions, potentially revealing its role in biogeochemical processes in marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyRoseivirgaceae
GenusRoseivirga
SpeciesRoseivirga seohaensis
StrainSW-152

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseivirga seohaensis strain SW-152 contig_9, whole genome shotgun

Gene Summary

Adenine Count

1270053 bp

Thymine Count

1255299 bp

Guanine Count

810009 bp

Cytosine Count

824969 bp

Genome Length

4160330 bp

Protein-coding Genes

3614 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAWW67_13145Not AvailablePositive3974344 - 397476616415.7
hypothetical proteinAWW67_13150Not AvailableNegative3974842 - 39750728234.75
hypothetical proteinAWW67_13155Not AvailableNegative3975073 - 39752797860.62
hypothetical proteinAWW67_13160Not AvailablePositive3975747 - 39759628588.96
hypothetical proteinAWW67_13165Not AvailablePositive3976147 - 397654515619.9
relaxase/mobilization nucleaseAWW67_13170Not AvailablePositive3976530 - 397778046996.6
conjugal transfer protein tragAWW67_13175Not AvailablePositive3977794 - 397977674829.4
hypothetical proteinAWW67_13180Not AvailableNegative3979801 - 398063732853.4
hypothetical proteinAWW67_13185Not AvailablePositive3980865 - 398123914013.5
hypothetical proteinAWW67_13190Not AvailablePositive3981529 - 398237133368.1

Displaying genes 3471 – 3480 of 3657 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.